Use of whole genome sequencing for detection of antimicrobial resistance: Mycobacterium tuberculosis, a model organism

V Escuyer - American Society for Clinical Laboratory Science, 2019 - clsjournal.ascls.org
Increasing rates of antimicrobial resistance is a public health crisis. The emergence of
resistant pathogens is multi-factorial but is at least partially due to inappropriate antibiotic …

[HTML][HTML] Whole-Genome Sequencing for Rapid Susceptibility Testing of M. tuberculosis

CU Köser, JM Bryant, J Becq, ME Török… - New England journal …, 2013 - Mass Medical Soc
Whole-Genome Sequencing for Rapid Susceptibility Testing of M. tuberculosis | NEJM Skip to
main content NEJM Group Follow Us Facebook Twitter Instagram YouTube LinkedIn Prepare …

[HTML][HTML] Removing the bottleneck in whole genome sequencing of Mycobacterium tuberculosis for rapid drug resistance analysis: a call to action

R McNerney, TG Clark, S Campino, C Rodrigues… - International journal of …, 2017 - Elsevier
Whole genome sequencing (WGS) can provide a comprehensive analysis of Mycobacterium
tuberculosis mutations that cause resistance to anti-tuberculosis drugs. With the deployment …

[HTML][HTML] Value of routine whole genome sequencing for Mycobacterium tuberculosis drug resistance detection

C Lam, E Martinez, T Crighton, C Furlong… - International Journal of …, 2021 - Elsevier
Routine whole genome sequencing (WGS) of pathogens is becoming more feasible as
sequencing costs decrease and access to benchtop sequencing equipment and …

[HTML][HTML] Deciphering drug resistance in Mycobacterium tuberculosis using whole-genome sequencing: progress, promise, and challenges

KA Cohen, AL Manson, CA Desjardins, T Abeel… - Genome medicine, 2019 - Springer
Tuberculosis (TB) is a global infectious threat that is intensified by an increasing incidence of
highly drug-resistant disease. Whole-genome sequencing (WGS) studies of Mycobacterium …

[HTML][HTML] Whole genome sequencing of Mycobacterium tuberculosis for detection of drug resistance: a systematic review

D Papaventsis, N Casali, I Kontsevaya… - Clinical Microbiology …, 2017 - Elsevier
Objectives We conducted a systematic review to determine the diagnostic accuracy of whole
genome sequencing (WGS) of Mycobacterium tuberculosis for the detection of resistance to …

[HTML][HTML] Whole genome sequencing for M/XDR tuberculosis surveillance and for resistance testing

TM Walker, M Merker, TA Kohl, DW Crook… - Clinical Microbiology …, 2017 - Elsevier
Whole genome sequencing (WGS) can help to relate Mycobacterium tuberculosis genomes
to one another to assess genetic relatedness and infer the likelihood of transmission …

[HTML][HTML] Mycobacterium tuberculosis complex whole-genome sequencing in New York State: Implementation of a reduced phenotypic drug susceptibility testing …

J Shea, TA Halse, H Modestil, C Kearns, RC Fowler… - Tuberculosis, 2023 - Elsevier
Whole-genome sequencing (WGS) can predict drug resistance and antimicrobial
susceptibility in Mycobacterium tuberculosis complex (MTBC) and has shown promise in …

Whole-genome sequencing for the diagnosis of drug-resistant tuberculosis

B Javid, ME Török - The Lancet Infectious Diseases, 2016 - thelancet.com
Mycobacterium tuberculosis. We agree that whole-genome sequencing holds great promise
for the rapid diagnosis of drug-resistant tuberculosis, and acknowledge that genetic testing …

Evaluation of whole-genome sequencing for mycobacterial species identification and drug susceptibility testing in a clinical setting: a large-scale prospective …

TP Quan, Z Bawa, D Foster, T Walker… - Journal of clinical …, 2018 - Am Soc Microbiol
Use of whole-genome sequencing (WGS) for routine mycobacterial species identification
and drug susceptibility testing (DST) is becoming a reality. We compared the performances …