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Research ArticleResearch and Reports

Use of Diagnostic Metagenomics in the Clinical Microbiology Laboratory

Stephanie L Mitchell
American Society for Clinical Laboratory Science April 2019, 32 (2) 78-84; DOI: https://doi.org/10.29074/ascls.2019001768
Stephanie L Mitchell
University of Pittsburg School of Medicine
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Article Information

vol. 32 no. 2 78-84
DOI 
https://doi.org/10.29074/ascls.2019001768

Published By 
American Society for Clinical Laboratory Science
Print ISSN 
0894-959X
Online ISSN 
1945-3574
History 
  • Received June 3, 2019
  • Accepted September 5, 2019
  • Published online February 7, 2023.

Copyright & Usage 
© 2019 © 2019 The American Society for Clinical Laboratory Science American Society for Clinical Laboratory Science

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American Society for Clinical Laboratory Science: 32 (2)
American Society for Clinical Laboratory Science
Vol. 32, Issue 2
1 Apr 2019
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Use of Diagnostic Metagenomics in the Clinical Microbiology Laboratory
Stephanie L Mitchell
American Society for Clinical Laboratory Science Apr 2019, 32 (2) 78-84; DOI: 10.29074/ascls.2019001768

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Use of Diagnostic Metagenomics in the Clinical Microbiology Laboratory
Stephanie L Mitchell
American Society for Clinical Laboratory Science Apr 2019, 32 (2) 78-84; DOI: 10.29074/ascls.2019001768
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  • Article
    • LEARNING OBJECTIVES
    • ABSTRACT
    • INTRODUCTION
    • THE CLINICAL LABORATORY APPROACH TO mNGS IMPLEMENTATION
    • ADVANTAGES OF mNGS AS A DIAGNOSTIC TEST
    • CHALLENGES, LIMITATIONS, AND OTHER CONSIDERATIONS OF mNGS APPLICATIONS
    • THE FUTURE OF mNGS
    • References
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More in this TOC Section

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  • Polyagglutination: Lectin Isolation for T-Activated Red Cells
  • Strength of Direct Antiglobulin Test as an Indicator of Disease Severity in Autoimmune Hemolytic Anemia
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Keywords

  • BAL - bronchoalveolar lavage
  • cfDNA - cell-free DNA
  • CMV - cytomegalovirus
  • CSF - cerebral spinal fluid
  • GI - gastrointestinal
  • HSV - herpes simplex virus
  • IFI - invasive fungal infection
  • mNGS - metagenomic next-generation sequencing
  • NGS - next generation sequencing
  • OAI - osteoarticular infection
  • PCR - polymerase chain reaction
  • next-generation sequencing
  • metagenomics
  • clinical laboratory
  • molecular assay

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